Stem-loop ami-mir-218-2

Accession

MI0029803

Description

Alligator mississippiensis ami-mir-218-2 precursor miRNA

Sequence

aaugggguuuuccuUUGUGCUUGAUCUAACCAUGUgguagaacaauacaaauugaacaugguucugucaagcaccauggaaggcugcaua
.(((.((((((((...(((((((((..((((((((....................))))))))..)))))))))...)))))))).))).

Structure

a   g        uUU         CU        gguagaaca 
 aug gguuuucc   GUGCUUGAU  AACCAUGU         a
 ||| ||||||||   |||||||||  ||||||||          
 uac ucggaagg   cacgaacug  uugguaca         u
a   g        uac         uc        aguuaaaca 

Annotation confidence Not enough data

Genome context

AKHW03002337.1: 9433963-9434052 [+]

Mature ami-miR-218-5p

• Accession: MIMAT0038247
• Description: Alligator mississippiensis ami-miR-218-5p mature miRNA
• Sequence: 15 - UUGUGCUUGAUCUAACCAUGU - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196