Stem-loop ami-mir-222b

Accession

MI0029808

Description

Alligator mississippiensis ami-mir-222b precursor miRNA

Sequence

gauguaauugggUGCUCAGUAGUCGGUGUAGAAUCugucugacauugauaccaacAGCUACAUCUGAUUACUGGGUCACuaauugcaucaucaa
(((((((((((..((((((((((((((((((...((((.((..........))))))))))).)))))))))))))..))))))))))).....

Structure

-----           gU             -     AAU    c  acau 
     gauguaauugg  GCUCAGUAGUCGG UGUAG   Cugu ug    u
     |||||||||||  ||||||||||||| |||||   |||| ||     
     cuacguuaauC  UGGGUCAUUAGUC ACAUC   GAca ac    g
aacua           AC             U     ---    -  caua 

Annotation confidence Not enough data

Genome context

AKHW03000635.1: 5891717-5891810 [+]

Mature ami-miR-222b-5p

• Accession: MIMAT0038256
• Description: Alligator mississippiensis ami-miR-222b-5p mature miRNA
• Sequence: 13 - UGCUCAGUAGUCGGUGUAGAAUC - 35
• Evidence: experimental ; Illumina [1]

Mature ami-miR-222b-3p

• Accession: MIMAT0038257
• Description: Alligator mississippiensis ami-miR-222b-3p mature miRNA
• Sequence: 56 - AGCUACAUCUGAUUACUGGGUCAC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196