Stem-loop ami-mir-302b

Accession

MI0029813

Description

Alligator mississippiensis ami-mir-302b precursor miRNA

Sequence

gaaguaugguuucccuucuacuuuaacauggaggugcuuucugugacuuauaagaagUAAGUGCUUCCAUGUUUUAGUagaggugaaauccuguucu
(((....((((((.((((((((..(((((((((((((((.((.............)).)))))))))))))))..)))))))).))))))...))).

Structure

-   guau      c        uu               u  gugac 
 gaa    gguuuc cuucuacu  aacauggaggugcuu cu     u
 |||    |||||| ||||||||  ||||||||||||||| ||     u
 cuu    cuaaag ggagaUGA  UUGUACCUUCGUGAA ga     a
u   -guc      u        UU               U  agaau 

Annotation confidence Not enough data

Genome context

AKHW03006071.1: 213474-213570 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ami-mir-302b

Mature ami-miR-302b-3p

• Accession: MIMAT0038265
• Description: Alligator mississippiensis ami-miR-302b-3p mature miRNA
• Sequence: 58 - UAAGUGCUUCCAUGUUUUAGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196