Stem-loop ami-mir-365-2

Accession

MI0029819

Description

Alligator mississippiensis ami-mir-365-2 precursor miRNA

Sequence

guggcagcaagaaaaaugAGGGACUUUCAGGGGCAGCUGUguuuuacuaacccagucaUAAUGCCCCUAAAAAUCCUUAuuguucuugcaauguucaa
..(((((((((((.((((((((..(((.(((((((((((.(((.....))).)))).....))))))).))).)))))))).)))))))..))))...

Structure

-gu    --       a        AC   C       -----    U   u 
   ggca  gcaagaa aaugAGGG  UUU AGGGGCA     GCUG guu u
   ||||  ||||||| ||||||||  ||| |||||||     |||| ||| a
   uugu  cguucuu uuAUUCCU  AAA UCCCCGU     ugac caa c
aac    aa       g        -A   A       AAUac    c   u 

Annotation confidence Not enough data

Genome context

AKHW03004113.1: 5161026-5161123 [-]

Mature ami-miR-365-3p

• Accession: MIMAT0038272
• Description: Alligator mississippiensis ami-miR-365-3p mature miRNA
• Sequence: 59 - UAAUGCCCCUAAAAAUCCUUA - 79
• Evidence: experimental ; Illumina [1]

Mature ami-miR-365-2-5p

• Accession: MIMAT0038273
• Description: Alligator mississippiensis ami-miR-365-2-5p mature miRNA
• Sequence: 19 - AGGGACUUUCAGGGGCAGCUGU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196