miRBase entry: ami-mir-367

Stem-loop ami-mir-367

Accession

MI0029820

Description

Alligator mississippiensis ami-mir-367 precursor miRNA

Sequence

ucuucaacuacaggcugcuacuguugcuaauaugcaacucuguuaugucaaaauuggAAUUGCACUUUAGCAAUGGUGauggacuguaagacacac
........(((((.(((.((((((((((((..(((((.((((............)))).)))))..)))))))))))).))).)))))........

Structure

ucuucaac     g   c            ua     c    uuaug 
        uacag cug uacuguugcuaa  ugcaa ucug     u
        ||||| ||| ||||||||||||  ||||| ||||      
        auguc ggu GUGGUAACGAUU  ACGUU Aggu     c
cacacaga     a   a            UC     A    uaaaa

Annotation confidence Not enough data

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Genome context

AKHW03006071.1: 214626-214721 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ami-mir-367

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ami-miR-367-3p

Accession	MIMAT0038274
Description	Alligator mississippiensis ami-miR-367-3p mature miRNA
Sequence	58 - AAUUGCACUUUAGCAAUGGUG - 78
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196