Stem-loop ami-mir-375

Accession

MI0029821

Description

Alligator mississippiensis ami-mir-375 precursor miRNA

Sequence

cuggccgcccucugcgccugccuggcgucgagcccgacgugcaagaccugacgugaauguUUUGUUCGUUCGGCUCGCGUUaggcaggcccagccugucu
..(((......(((.((((((((((((.((((((.((((.(((((((.(.......).))))))).)))).)))))))))))))))))).)))...))).

Structure

cu   cgcccu   c            u      c    u       c ga 
  ggc      cug gccugccuggcg cgagcc gacg gcaagac u  c
  |||      ||| |||||||||||| |||||| |||| ||||||| |  g
  cug      gac cggacggaUUGC GCUCGG UUGC UGUUUug a  u
-u   ---ucc   c            -      C    U       u ag 

Annotation confidence Not enough data

Genome context

AKHW03006149.1: 6770-6869 [-]

Mature ami-miR-375-3p

• Accession: MIMAT0038275
• Description: Alligator mississippiensis ami-miR-375-3p mature miRNA
• Sequence: 61 - UUUGUUCGUUCGGCUCGCGUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196