Stem-loop ami-mir-455

Accession

MI0029830

Description

Alligator mississippiensis ami-mir-455 precursor miRNA

Sequence

ucccuggugugagggUAUGUGCCCUUGGACUACAUCGuggaagccagcaccAUGCAGUCCAUGGGCAUAUACAcuugccucaagguuuauuu
.((.(((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).))).)).......

Structure

------u  c   u     g          U      A   C   gaa 
       cc ugg gugag gUAUGUGCCC UGGACU CAU Gug   g
       || ||| ||||| |||||||||| |||||| ||| |||    
       gg acu cguuc CAUAUACGGG ACCUGA GUA cac   c
uuuauuu  a   c     A          U      C   c   gac 

Annotation confidence Not enough data

Genome context

AKHW03006215.1: 12996628-12996719 [+]

Mature ami-miR-455-5p

• Accession: MIMAT0038287
• Description: Alligator mississippiensis ami-miR-455-5p mature miRNA
• Sequence: 16 - UAUGUGCCCUUGGACUACAUCG - 37
• Evidence: experimental ; Illumina [1]

Mature ami-miR-455-3p

• Accession: MIMAT0038288
• Description: Alligator mississippiensis ami-miR-455-3p mature miRNA
• Sequence: 52 - AUGCAGUCCAUGGGCAUAUACA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196