Stem-loop ami-mir-456

Accession

MI0029831

Description

Alligator mississippiensis ami-mir-456 precursor miRNA

Sequence

uguguaugugugagcaggcaucuucucagccuacauguggauucuuaaaucugCAGGCUGGUUAGAUGGUUGUcauacauucaccuga
.(((.((((((((.(((.(((((..(((((((....(((((((....))))))))))))))..))))).))))))))))).)))....

Structure

---u   u        g   g     uc       acau       c 
    gug auguguga cag caucu  ucagccu    guggauu u
    ||| |||||||| ||| |||||  |||||||    |||||||  
    cac uacauacU GUU GUAGA  GGUCGGA    Cgucuaa u
aguc   u        -   G     UU       ----       a 

Annotation confidence Not enough data

Genome context

AKHW03006164.1: 11020018-11020105 [+]

Mature ami-miR-456-3p

• Accession: MIMAT0038289
• Description: Alligator mississippiensis ami-miR-456-3p mature miRNA
• Sequence: 54 - CAGGCUGGUUAGAUGGUUGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196