Stem-loop ami-mir-489

Accession

MI0029836

Description

Alligator mississippiensis ami-mir-489 precursor miRNA

Sequence

gugguggcuuggUGGUCGUAUGUAUGACGUCAUUuacuuggacuuuuaggagUGACAUCAUAUGUACGGCUGCUaaacugcugcau
(((((((.(((((((((((((((((((.((((((..(((((....))))))))))).))))))))))))))))))).)))))))..

Structure

--       c                   C      ua     a 
  guggugg uuggUGGUCGUAUGUAUGA GUCAUU  cuugg c
  ||||||| ||||||||||||||||||| ||||||  |||||  
  cgucguc aaUCGUCGGCAUGUAUACU CAGUga  ggauu u
ua       a                   A      --     u 

Annotation confidence Not enough data

Genome context

AKHW03005461.1: 7248472-7248557 [-]

Mature ami-miR-489-5p

• Accession: MIMAT0038295
• Description: Alligator mississippiensis ami-miR-489-5p mature miRNA
• Sequence: 13 - UGGUCGUAUGUAUGACGUCAUU - 34
• Evidence: experimental ; Illumina [1]

Mature ami-miR-489-3p

• Accession: MIMAT0038296
• Description: Alligator mississippiensis ami-miR-489-3p mature miRNA
• Sequence: 53 - UGACAUCAUAUGUACGGCUGCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196