Stem-loop ami-mir-497

Accession

MI0029838

Description

Alligator mississippiensis ami-mir-497 precursor miRNA

Sequence

caggcccagccccgcccCAGCAGCACAUCAUGGUUUGUggggucucguggcaCAGACCAUGGCGUGGUGCUACCgcggggccggggagac
....(((.(((((((...((((.(((.((((((((((((...........)))))))))))).))).))))...))))))).))).....

Structure

-cagg   a       ccC    G   A            gggu 
     ccc gccccgc   AGCA CAC UCAUGGUUUGUg    c
     ||| |||||||   |||| ||| ||||||||||||    u
     ggg cggggcg   UCGU GUG GGUACCAGACac    c
cagag   c       CCA    G   C            ggug 

Annotation confidence Not enough data

Genome context

AKHW03004623.1: 56255-56344 [-]

Mature ami-miR-497-5p

• Accession: MIMAT0038299
• Description: Alligator mississippiensis ami-miR-497-5p mature miRNA
• Sequence: 18 - CAGCAGCACAUCAUGGUUUGU - 38
• Evidence: experimental ; Illumina [1]

Mature ami-miR-497-3p

• Accession: MIMAT0038300
• Description: Alligator mississippiensis ami-miR-497-3p mature miRNA
• Sequence: 53 - CAGACCAUGGCGUGGUGCUACC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196