Stem-loop ami-mir-551-1

Accession

MI0029840

Description

Alligator mississippiensis ami-mir-551-1 precursor miRNA

Sequence

uucugcuuuaaccuugGAAAUCAAGGAUGGGUGAAGCcuguuggaauaacucuagGCGACCCAUACUUGGUUUCAagggucagcagggauu
(((((((...(((((.(((((((((..(((((...(((((..(......)..))))).)))))..))))))))).))))).)))))))...

Structure

---       uua     g         GA     GAA     uu ga 
   uucugcu   accuu GAAAUCAAG  UGGGU   GCcug  g  a
   |||||||   ||||| |||||||||  |||||   |||||  |   
   gggacga   uggga CUUUGGUUC  ACCCA   CGgau  c  u
uua       --c     A         AU     --G     cu aa 

Annotation confidence Not enough data

Genome context

AKHW03004073.1: 2467664-2467754 [+]

Mature ami-miR-551-5p

• Accession: MIMAT0038303
• Description: Alligator mississippiensis ami-miR-551-5p mature miRNA
• Sequence: 17 - GAAAUCAAGGAUGGGUGAAGC - 37
• Evidence: experimental ; Illumina [1]

Mature ami-miR-551-3p

• Accession: MIMAT0038304
• Description: Alligator mississippiensis ami-miR-551-3p mature miRNA
• Sequence: 56 - GCGACCCAUACUUGGUUUCA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196