Stem-loop ami-mir-1329

Accession

MI0029846

Description

Alligator mississippiensis ami-mir-1329 precursor miRNA

Sequence

ggucugguuguagagaUACAGUGAUCAGGUUACGAUGAUuucucaaguaacaaccucguagcuugaucacaauaucccuaugacuuagauaa
.((((((((((((.((((..((((((((((((((((((....)))..........)))))))))))))))..)))).))))))).)))))..

Structure

-g     -       a    CA               ----------   U 
  gucug guuguag gaUA  GUGAUCAGGUUACGA          UGA u
  ||||| ||||||| ||||  |||||||||||||||          |||  
  uagau caguauc cuau  cacuaguucgaugcu          acu u
aa     u       c    aa               ccaacaauga   c 

Annotation confidence Not enough data

Genome context

AKHW03003826.1: 10607146-10607237 [+]

Mature ami-miR-1329-5p

• Accession: MIMAT0038311
• Description: Alligator mississippiensis ami-miR-1329-5p mature miRNA
• Sequence: 17 - UACAGUGAUCAGGUUACGAUGAU - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196