Stem-loop ami-mir-1720

Accession

MI0029855

Description

Alligator mississippiensis ami-mir-1720 precursor miRNA

Sequence

cuucugaucaccucaguuguugcuuuugugagcauuucaugggaAAGCAACAAGAGGGCAGGUCUGAaaccc
.(((.((((..(((..(((((((((((((((.....))))..)))))))))))..)))..)))).)))....

Structure

---c   u    ac   ag           --    g 
    uuc gauc  cuc  uuguugcuuuu  guga c
    ||| ||||  |||  |||||||||||  |||| a
    aAG CUGG  GGG  AACAACGAAag  uacu u
ccca   U    AC   AG           gg    u 

Annotation confidence Not enough data

Genome context

AKHW03006295.1: 11914844-11914915 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ami-mir-1720

Mature ami-miR-1720-3p

• Accession: MIMAT0038324
• Description: Alligator mississippiensis ami-miR-1720-3p mature miRNA
• Sequence: 45 - AAGCAACAAGAGGGCAGGUCUGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196