Stem-loop ami-mir-9598

Accession

MI0029865

Description

Alligator mississippiensis ami-mir-9598 precursor miRNA

Sequence

cuucccuucucccccccCUUUCAAAAUUCUAGAUCUGCCuaugggcaugggUAGUACUAGGAUUUUGGAAAGGGggugggagggcac
......((((((((((((((((((((((((((..((((((((....))))))))..)))))))))).))))))))).)))))))...

Structure

cuuccc       -         -          AU        g 
      uucuccc ccccCUUUC AAAAUUCUAG  CUGCCuau g
      ||||||| ||||||||| ||||||||||  ||||||||  
      gggaggg ggGGGAAAG UUUUAGGAUC  GAUgggua g
---cac       u         G          AU        c 

Annotation confidence Not enough data

Genome context

AKHW03005564.1: 1774355-1774441 [+]

Mature ami-miR-9598-5p

• Accession: MIMAT0038340
• Description: Alligator mississippiensis ami-miR-9598-5p mature miRNA
• Sequence: 18 - CUUUCAAAAUUCUAGAUCUGCC - 39
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9598-3p

• Accession: MIMAT0038341
• Description: Alligator mississippiensis ami-miR-9598-3p mature miRNA
• Sequence: 52 - UAGUACUAGGAUUUUGGAAAGGG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196