Stem-loop ami-mir-9603

Accession

MI0029870

Description

Alligator mississippiensis ami-mir-9603 precursor miRNA

Sequence

acacauccuuggcaauaucUGGGGCACAUCUCUAGAAGCaggaauagucaggaugcucugcUUCUAGUGACUUGCCUUGGAGAuugcuggaggu
......((((.(((((.(((((((((..((.(((((((((((..............))))))))))).))..))))))))).)))))..)))).

Structure

acacau    -g     a         CA  U           aauagu 
      ccuu  gcaau ucUGGGGCA  UC CUAGAAGCagg      c
      ||||  ||||| |||||||||  || |||||||||||       
      ggag  cguuA AGGUUCCGU  AG GAUCUUcgucu      a
-----u    gu     G         UC  U           cguagg 

Annotation confidence Not enough data

Genome context

AKHW03006295.1: 18005410-18005503 [+]

Mature ami-miR-9603-5p

• Accession: MIMAT0038350
• Description: Alligator mississippiensis ami-miR-9603-5p mature miRNA
• Sequence: 20 - UGGGGCACAUCUCUAGAAGC - 39
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9603-3p

• Accession: MIMAT0038351
• Description: Alligator mississippiensis ami-miR-9603-3p mature miRNA
• Sequence: 62 - UUCUAGUGACUUGCCUUGGAGA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196