Stem-loop ami-mir-9606

Accession

MI0029873

Description

Alligator mississippiensis ami-mir-9606 precursor miRNA

Sequence

guggaaugcagaggCAAGGAUUUCUUAGGGUGAUaucuuuuaauuaucuuuucuuaUCACUCUAAUAAAUCCUUGCCucuucgacaccau
((((..((.((((((((((((((.(((((((((((...................))))))))))).)))))))))))))).))...))))

Structure

    -aa  c              C           ucuuuuaa 
gugg   ug agaggCAAGGAUUU UUAGGGUGAUa        u
||||   || |||||||||||||| |||||||||||        u
uacc   gc ucuCCGUUCCUAAA AAUCUCACUau        a
    aca  u              U           ucuuuucu 

Annotation confidence Not enough data

Genome context

AKHW03002120.1: 102299-102388 [-]

Mature ami-miR-9606-5p

• Accession: MIMAT0038356
• Description: Alligator mississippiensis ami-miR-9606-5p mature miRNA
• Sequence: 15 - CAAGGAUUUCUUAGGGUGAU - 34
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9606-3p

• Accession: MIMAT0038357
• Description: Alligator mississippiensis ami-miR-9606-3p mature miRNA
• Sequence: 57 - UCACUCUAAUAAAUCCUUGCC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196