Stem-loop ami-mir-9610

Accession

MI0029877

Description

Alligator mississippiensis ami-mir-9610 precursor miRNA

Sequence

uaaccuugUGUGACAGUAACUCCUUCUAGGaacaugugcauccagcuuuCCAGGAGGCUGUCUGUCACACCAggaaa
...(((.(((((((((.....((((((.((((..((......))...))))))))))....))))))))).)))...

Structure

uaa   u         UAACU      A    -ca  ug 
   ccu gUGUGACAG     CCUUCU GGaa   ug  c
   ||| |||||||||     |||||| ||||   ||   
   ggA CACACUGUC     GGAGGA CCuu   ac  a
aaa   C         -UGUC      -    ucg  cu 

Annotation confidence Not enough data

Genome context

AKHW03005076.1: 302363-302439 [+]

Mature ami-miR-9610-5p

• Accession: MIMAT0038364
• Description: Alligator mississippiensis ami-miR-9610-5p mature miRNA
• Sequence: 9 - UGUGACAGUAACUCCUUCUAGG - 30
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9610-3p

• Accession: MIMAT0038365
• Description: Alligator mississippiensis ami-miR-9610-3p mature miRNA
• Sequence: 50 - CCAGGAGGCUGUCUGUCACACCA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196