Stem-loop ami-mir-9612

Accession

MI0029879

Description

Alligator mississippiensis ami-mir-9612 precursor miRNA

Sequence

acgaagcagguauacUUAACUUCUGCUCUUCUUUCAuuucaugucuaacauuccaugAAAGAAGGGUAGGAGUUGAGUAcacaugcuucaucugu
..((((((.((.(((((((((((((((((((((((((...((((...))))...))))))))))))))))))))))))).)).))))))......

Structure

----ac      g  a                         uuc    c 
      gaagca gu uacUUAACUUCUGCUCUUCUUUCAu   augu  
      |||||| || |||||||||||||||||||||||||   |||| u
      cuucgu ca AUGAGUUGAGGAUGGGAAGAAAgua   uaca  
ugucua      a  c                         ccu    a 

Annotation confidence Not enough data

Genome context

AKHW03002956.1: 26838108-26838202 [+]

Mature ami-miR-9612-5p

• Accession: MIMAT0038368
• Description: Alligator mississippiensis ami-miR-9612-5p mature miRNA
• Sequence: 16 - UUAACUUCUGCUCUUCUUUCA - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9612-3p

• Accession: MIMAT0038369
• Description: Alligator mississippiensis ami-miR-9612-3p mature miRNA
• Sequence: 58 - AAAGAAGGGUAGGAGUUGAGUA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196