Stem-loop ami-mir-9613

Accession

MI0029880

Description

Alligator mississippiensis ami-mir-9613 precursor miRNA

Sequence

cugcuccuugcuuuuUUCUGCAACAGGUGCCAGUUCacugcucuguaguuucuguggaACUGGCGUCCGUUGCAGGGAUgugcggggagcgucc
.((((((((((...((((((((((.((((((((((((((((...))))).......))))))))).))))))))))))...))))))))))...

Structure

--c          uuu          A  -         -------     u 
   ugcuccuugc   uUUCUGCAAC GG UGCCAGUUC       acugc  
   ||||||||||   |||||||||| || |||||||||       ||||| c
   gcgaggggcg   AGGGACGUUG CC GCGGUCAag       ugaug  
ccu          ugU          -  U         gugucuu     u 

Annotation confidence Not enough data

Genome context

AKHW03006099.1: 10617010-10617103 [-]

Mature ami-miR-9613-5p

• Accession: MIMAT0038370
• Description: Alligator mississippiensis ami-miR-9613-5p mature miRNA
• Sequence: 16 - UUCUGCAACAGGUGCCAGUUC - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9613-3p

• Accession: MIMAT0038371
• Description: Alligator mississippiensis ami-miR-9613-3p mature miRNA
• Sequence: 59 - ACUGGCGUCCGUUGCAGGGAU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196