Stem-loop cli-mir-10a

Accession

MI0029903

Description

Columba livia cli-mir-10a precursor miRNA

Sequence

1985261 reads, 23525.0 reads per million, 30 experiments

cuucuauaugUACCCUGUAGAUCCGAAUUUGUguaaaggaaguugggucaCAAAUUCGUAUCUAGGGGAAUauguaguug
...((((((((.((((.(((((.((((((((((...............)))))))))).))))))))).))))))))...

Structure

cuu        A    G     C          uaaagg 
   cuauaugU CCCU UAGAU CGAAUUUGUg      a
   |||||||| |||| ||||| ||||||||||      a
   gauguaUA GGGG AUCUA GCUUAAACac      g
guu        A    -     U          uggguu 

Annotation confidence High

Genome context

27: 2050933-2051012 [+]

Mature cli-miR-10a-5p

• Accession: MIMAT0038404
• Description: Columba livia cli-miR-10a-5p mature miRNA
• Sequence: 11 - UACCCUGUAGAUCCGAAUUUGU - 32
• Evidence: experimental ; Illumina [1]

Mature cli-miR-10a-3p

• Accession: MIMAT0038405
• Description: Columba livia cli-miR-10a-3p mature miRNA
• Sequence: 51 - CAAAUUCGUAUCUAGGGGAAU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196