Stem-loop cli-mir-10b

Accession

MI0029904

Description

Columba livia cli-mir-10b precursor miRNA

Sequence

660587 reads, 3516.0 reads per million, 29 experiments

uuacguugucuauauaUACCCUGUAGAACCGAAUUUGUgugauauucauauagucacAGAUUCGAUUCUAGGGGAAUAUauggucgaugaaa
...(((((.((((((((.((((.(((((.((((((((((...(((....)))..)))))))))).))))))))).)))))))).)))))...

Structure

uua     u        A    G     C          uga   u 
   cguug cuauauaU CCCU UAGAA CGAAUUUGUg   uau c
   ||||| |||||||| |||| ||||| ||||||||||   |||  
   guagc gguaUAUA GGGG AUCUU GCUUAGAcac   aua a
aaa     u        A    -     A          -ug   u 

Annotation confidence High

Genome context

6: 13276952-13277043 [-]

Mature cli-miR-10b-5p

• Accession: MIMAT0038406
• Description: Columba livia cli-miR-10b-5p mature miRNA
• Sequence: 17 - UACCCUGUAGAACCGAAUUUGU - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-10b-3p

• Accession: MIMAT0038407
• Description: Columba livia cli-miR-10b-3p mature miRNA
• Sequence: 58 - AGAUUCGAUUCUAGGGGAAUAU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196