Stem-loop cli-mir-10c

Accession

MI0029905

Description

Columba livia cli-mir-10c precursor miRNA

Sequence

83330 reads, 410.0 reads per million, 24 experiments

ccccgucuccuauaugUACCCUGUAGACUCGAAUUUGUgugagcgucucccagucaCAAAUUCGUCUCUAGGGGAAUauaugggcgaugcca
...((((.(((((((((.((((.((((..((((((((((...((........))))))))))))..)))))))).))))))))).))))...

Structure

ccc    u         A    G    CU          uga  guc 
   cguc ccuauaugU CCCU UAGA  CGAAUUUGUg   gc   u
   |||| ||||||||| |||| ||||  ||||||||||   ||    
   guag ggguauaUA GGGG AUCU  GCUUAAACac   ug   c
acc    c         A    -    CU          ---  acc 

Annotation confidence High

Genome context

KB376284.1: 255100-255191 [+]

Mature cli-miR-10c-5p

• Accession: MIMAT0038408
• Description: Columba livia cli-miR-10c-5p mature miRNA
• Sequence: 17 - UACCCUGUAGACUCGAAUUUGU - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-10c-3p

• Accession: MIMAT0038409
• Description: Columba livia cli-miR-10c-3p mature miRNA
• Sequence: 57 - CAAAUUCGUCUCUAGGGGAAU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196