miRBase entry: cli-mir-15a

Stem-loop cli-mir-15a

Accession

MI0029906

Description

Columba livia cli-mir-15a precursor miRNA

Sequence

uuggcauaacgUAGCAGCACAUAAUGGUUUGUGgguuuugaaaaggugCAGGCCAUAUUGUGCUGCCUCaaaaauacaa
..........(..((((((((..((((((((((.............))))))))))..))))))))..)..........

Structure

uuggcauaac UA        UA          gguuu 
          g  GCAGCACA  AUGGUUUGUG     u
          |  ||||||||  ||||||||||     g
          C  CGUCGUGU  UACCGGACgu     a
aacauaaaaa UC        UA          ggaaa

Annotation confidence Not enough data

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Genome context

KB375372.1: 15185597-15185675 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-15a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-15a-5p

Accession	MIMAT0038410
Description	Columba livia cli-miR-15a-5p mature miRNA
Sequence	12 - UAGCAGCACAUAAUGGUUUGUG - 33
Evidence	experimental Illumina [1]

Mature cli-miR-15a-3p

Accession	MIMAT0038411
Description	Columba livia cli-miR-15a-3p mature miRNA
Sequence	49 - CAGGCCAUAUUGUGCUGCCUC - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196