Stem-loop cli-mir-21

Accession

MI0029920

Description

Columba livia cli-mir-21 precursor miRNA

Literature search

1 open access papers mention cli-mir-21
(1 sentences)

Sequence

8919366 reads, 72559.0 reads per million, 30 experiments

uccugucggaUAGCUUAUCAGACUGAUGUUGACuguuggaucucauggCAACAACAGUCGGUAGGCUGUCUgacauuu
...((((((((((((((((.(((((.(((((.((((........))))))))).)))))))))))))))))))))...

Structure

ucc                A     A     A    ugg 
   ugucggaUAGCUUAUC GACUG UGUUG Cugu   a
   |||||||||||||||| ||||| ||||| ||||    
   acagUCUGUCGGAUGG CUGAC ACAAC ggua   u
uuu                -     A     -    cuc 

Annotation confidence High

Genome context

19: 2549827-2549904 [-]

Mature cli-miR-21-5p

• Accession: MIMAT0038436
• Description: Columba livia cli-miR-21-5p mature miRNA
• Sequence: 11 - UAGCUUAUCAGACUGAUGUUGAC - 33
• Evidence: experimental ; Illumina [1]

Mature cli-miR-21-3p

• Accession: MIMAT0038437
• Description: Columba livia cli-miR-21-3p mature miRNA
• Sequence: 49 - CAACAACAGUCGGUAGGCUGUCU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196