Stem-loop cli-mir-22

Accession

MI0029921

Description

Columba livia cli-mir-22 precursor miRNA

Sequence

12462275 reads, 69543.0 reads per million, 30 experiments

cagcaccAGUUCUUCAGUGGCAAGCUUUauguccuucucuaguagcuaAAGCUGCCAGUUGAAGAACUGUUGaau
...((.((((((((((((((((.((((((..(.((.....)).)..))))))))))).))))))))))).))...

Structure

cag  c           -     A      ug c  u 
   ca cAGUUCUUCAG UGGCA GCUUUa  u cu c
   || ||||||||||| ||||| ||||||  | || u
   GU GUCAAGAAGUU ACCGU CGAAau  a ga c
uaa  U           G     -      cg u  u 

Annotation confidence High

Genome context

19: 4838237-4838311 [+]

Mature cli-miR-22-5p

• Accession: MIMAT0038438
• Description: Columba livia cli-miR-22-5p mature miRNA
• Sequence: 8 - AGUUCUUCAGUGGCAAGCUUU - 28
• Evidence: experimental ; Illumina [1]

Mature cli-miR-22-3p

• Accession: MIMAT0038439
• Description: Columba livia cli-miR-22-3p mature miRNA
• Sequence: 49 - AAGCUGCCAGUUGAAGAACUGUUG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196