miRBase entry: cli-mir-29a-2

Stem-loop cli-mir-29a-2

Accession

MI0029927

Description

Columba livia cli-mir-29a-2 precursor miRNA

Sequence

augucucuuacacaggcugaccgauuucucuugguguucagagucucaguuuuugucUAGCACCAUUUGAAAUCGGUUAugauguagggggaaa
...(((((((((((...(((((((((((...(((((((.(((.............))))))))))...))))))))))))).)))))))))...

Structure

aug         -  ggc           ucu       c   gucuc 
   ucucuuaca ca   ugaccgauuuc   ugguguu aga     a
   ||||||||| ||   |||||||||||   ||||||| |||     g
   gggggaugu gu   AUUGGCUAAAG   ACCACGA Ucu     u
aaa         a  ---           UUU       -   guuuu

Annotation confidence Not enough data

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Genome context

KB375734.1: 2207688-2207781 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-29a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-29a-3p

Accession	MIMAT0038448
Description	Columba livia cli-miR-29a-3p mature miRNA
Sequence	58 - UAGCACCAUUUGAAAUCGGUUA - 79
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196