Stem-loop cli-mir-30a

Accession

MI0029930

Description

Columba livia cli-mir-30a precursor miRNA

Sequence

ugagcgacUGUAAACAUCCUCGACUGGAAGCUgugaagcagcagauggggCUUUCAGUCGGAUGUUUGCAGCugccaa
((.(((.((((((((((((..(((((((((((.(............).))))))))))))))))))))))).))))).

Structure

-  a   a            UC           g gaagc 
 ug gcg cUGUAAACAUCC  GACUGGAAGCU u     a
 || ||| ||||||||||||  ||||||||||| |      
 ac cgu GACGUUUGUAGG  CUGACUUUCgg g     g
a  -   C            --           g uagac 

Annotation confidence Not enough data

Genome context

KB375528.1: 5103425-5103502 [+]

Mature cli-miR-30a-5p

• Accession: MIMAT0038451
• Description: Columba livia cli-miR-30a-5p mature miRNA
• Sequence: 9 - UGUAAACAUCCUCGACUGGAAGCU - 32
• Evidence: experimental ; Illumina [1]

Mature cli-miR-30a-3p

• Accession: MIMAT0038452
• Description: Columba livia cli-miR-30a-3p mature miRNA
• Sequence: 51 - CUUUCAGUCGGAUGUUUGCAGC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196