Stem-loop cli-mir-32

Accession

MI0029936

Description

Columba livia cli-mir-32 precursor miRNA

Sequence

5639 reads, 33.0 reads per million, 28 experiments

ucugguggagaUAUUGCACAUUACUAAGUUGCauguugucacggccucagugCAAUUUAGUGUGUGCGAUACUUucacaugagu
((..((((((.((((((((((.((((((((((((((((...))))....)))))))))))))))))))))).))))))..))..

Structure

--  ug      a          U            ----    u 
  uc  guggag UAUUGCACAU ACUAAGUUGCau    guug  
  ||  |||||| |||||||||| ||||||||||||    |||| c
  ag  cacuUU AUAGCGUGUG UGAUUUAACgug    cggc  
ug  ua      C          -            acuc    a 

Annotation confidence High

Genome context

2: 68115061-68115144 [-]

Mature cli-miR-32-5p

• Accession: MIMAT0038462
• Description: Columba livia cli-miR-32-5p mature miRNA
• Sequence: 12 - UAUUGCACAUUACUAAGUUGC - 32
• Evidence: experimental ; Illumina [1]

Mature cli-miR-32-3p

• Accession: MIMAT0038463
• Description: Columba livia cli-miR-32-3p mature miRNA
• Sequence: 53 - CAAUUUAGUGUGUGCGAUACUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196