Stem-loop cli-mir-33-1

Accession

MI0029937

Description

Columba livia cli-mir-33-1 precursor miRNA

Sequence

78712 reads, 355.0 reads per million, 28 experiments

ccuggguggcagcuguaGUGCAUUGUAGUUGCAUUGCAuguuguggcaguaacugugCAAUGUUCCUGCAGUGCAGUAcagaggcacucu
...(((((.(..(((((.((((((((((..(((((((((((((......)))).)))))))))..)))))))))).)))))..)))))).

Structure

ccu     g ag     G          UU         -    ug 
   gggug c  cugua UGCAUUGUAG  GCAUUGCAu guug  g
   ||||| |  ||||| ||||||||||  ||||||||| ||||   
   cucac g  gacAU ACGUGACGUC  UGUAACgug caau  c
--u     - ga     G          CU         u    ga 

Annotation confidence High

Genome context

1: 51190125-51190214 [-]

Mature cli-miR-33-5p

• Accession: MIMAT0038464
• Description: Columba livia cli-miR-33-5p mature miRNA
• Sequence: 18 - GUGCAUUGUAGUUGCAUUGCA - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-33-3p

• Accession: MIMAT0038465
• Description: Columba livia cli-miR-33-3p mature miRNA
• Sequence: 58 - CAAUGUUCCUGCAGUGCAGUA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196