Stem-loop cli-mir-33-2

Accession

MI0029938

Description

Columba livia cli-mir-33-2 precursor miRNA

Sequence

cccggcccucgcggggGUGCAUUGUAGUUGCAUUGCAugugucagacugggagugCAAUGCCCCUGCCAUGCAGCCcggcgggggccccg
...(((((((((.(((.(((((.((((..(((((((((...(((...)))..)))))))))..)))).))))).))).)))))))))...

Structure

ccc         g   G     U    UU         gug   g 
   ggcccucgc ggg UGCAU GUAG  GCAUUGCAu   uca  
   ||||||||| ||| ||||| ||||  |||||||||   ||| a
   ccgggggcg cCC ACGUA CGUC  CGUAACgug   ggu  
gcc         g   G     C    CC         -ag   c 

Annotation confidence Not enough data

Genome context

KB375439.1: 1338929-1339018 [+]

Mature cli-miR-33-5p

• Accession: MIMAT0038464
• Description: Columba livia cli-miR-33-5p mature miRNA
• Sequence: 17 - GUGCAUUGUAGUUGCAUUGCA - 37
• Evidence: experimental ; Illumina [1]

Mature cli-miR-33-2-3p

• Accession: MIMAT0038466
• Description: Columba livia cli-miR-33-2-3p mature miRNA
• Sequence: 56 - CAAUGCCCCUGCCAUGCAGCC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196