Stem-loop cli-mir-101-1

Accession

MI0029947

Description

Columba livia cli-mir-101-1 precursor miRNA

Sequence

899914 reads, 5172.0 reads per million, 30 experiments

acaggcugcccuggcUCAGUUAUCACAGUGCUGAUGCUGucucuuguaaaggUACAGUACUGUGAUAACUGAAggauggcagccauc
...(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....)))))))...

Structure

aca       cuggc                  A    Gucuc 
   ggcugcc     UCAGUUAUCACAGUGCUG UGCU     u
   |||||||     |||||||||||||||||| ||||      
   ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
cua       uaggA                  -    aaaug 

Annotation confidence High

Genome context

8: 19712026-19712112 [-]

Mature cli-miR-101-5p

• Accession: MIMAT0038482
• Description: Columba livia cli-miR-101-5p mature miRNA
• Sequence: 16 - UCAGUUAUCACAGUGCUGAUGCUG - 39
• Evidence: experimental ; Illumina [1]

Mature cli-miR-101-3p

• Accession: MIMAT0038483
• Description: Columba livia cli-miR-101-3p mature miRNA
• Sequence: 53 - UACAGUACUGUGAUAACUGAA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196