Stem-loop cli-mir-103-1

Accession

MI0029949

Description

Columba livia cli-mir-103-1 precursor miRNA

Sequence

329426 reads, 2013.0 reads per million, 30 experiments

ugucuuacugucuucGGCUUCUUUACAGUGCUGCCUUGUugcauauggaucaAGCAGCAUUGUACAGGGCUAUGAaggcauugagucu
.(.((((.(((((((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))..))))))).)))).).

Structure

u u    c       --    U  U           C   U g a 
 g cuua ugucuuc  GGCU CU UACAGUGCUGC UUG u c u
 | |||| |||||||  |||| || ||||||||||| ||| | |  
 c gagu acggaAG  UCGG GA AUGUUACGACG Aac a g a
u u    u       UA    -  C           -   u g u 

Annotation confidence High

Genome context

13: 3221490-3221577 [-]

Mature cli-miR-103-1-5p

• Accession: MIMAT0059182
• Description: Columba livia cli-miR-103-1-5p mature miRNA
• Sequence: 16 - GGCUUCUUUACAGUGCUGCCUUGU - 39
• Evidence: experimental ; Illumina [1]

Mature cli-miR-103-3p

• Accession: MIMAT0038485
• Description: Columba livia cli-miR-103-3p mature miRNA
• Sequence: 53 - AGCAGCAUUGUACAGGGCUAUGA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196