Stem-loop cli-mir-126

Accession

MI0029958

Description

Columba livia cli-mir-126 precursor miRNA

Sequence

4017061 reads, 19427.0 reads per million, 29 experiments

accgcuggugacggccCAUUAUUACUUUUGGUACGCGcugugacacuucaaacUCGUACCGUGAGUAAUAAUGCGcuguggccagcacg
...((((((.(((((.(((((((((((.(((((((.....(((....)))....))))))).))))))))))).))))).))))))...

Structure

acc      g     c           U       CGcug   c 
   gcuggu acggc CAUUAUUACUU UGGUACG     uga a
   |||||| ||||| ||||||||||| |||||||     |||  
   cgaccg ugucG GUAAUAAUGAG GCCAUGC     acu c
gca      g     C           U       -Ucaa   u 

Annotation confidence High

Genome context

17: 8052935-8053023 [-]

Mature cli-miR-126-5p

• Accession: MIMAT0038499
• Description: Columba livia cli-miR-126-5p mature miRNA
• Sequence: 17 - CAUUAUUACUUUUGGUACGCG - 37
• Evidence: experimental ; Illumina [1]

Mature cli-miR-126-3p

• Accession: MIMAT0038500
• Description: Columba livia cli-miR-126-3p mature miRNA
• Sequence: 54 - UCGUACCGUGAGUAAUAAUGCG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196