Stem-loop cli-mir-128-2

Accession

MI0029960

Description

Columba livia cli-mir-128-2 precursor miRNA

Sequence

630766 reads, 3576.0 reads per million, 30 experiments

gugcagcuggaagGGGGGCCGUUACACUGUAAGAGAgugaguagcaggucUCACAGUGAACCGGUCUCUUUUccuacugugu
..((((..(((((((((((((...((((((..((((.(........).))))))))))...)))))))))))))..))))..

Structure

gu    cu             UUA      AA    g gag 
  gcag  ggaagGGGGGCCG   CACUGU  GAGA u   u
  ||||  |||||||||||||   ||||||  |||| |    
  uguc  ccUUUUCUCUGGC   GUGACA  CUcu g   a
ug    au             CAA      --    g acg 

Annotation confidence High

Genome context

KB375337.1: 1465295-1465376 [-]

Mature cli-miR-128-5p

• Accession: MIMAT0038502
• Description: Columba livia cli-miR-128-5p mature miRNA
• Sequence: 14 - GGGGGCCGUUACACUGUAAGAGA - 36
• Evidence: experimental ; Illumina [1]

Mature cli-miR-128-3p

• Accession: MIMAT0038501
• Description: Columba livia cli-miR-128-3p mature miRNA
• Sequence: 51 - UCACAGUGAACCGGUCUCUUUU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196