miRBase entry: cli-mir-133a-2

Stem-loop cli-mir-133a-2


Accession
MI0029965
Description
Columba livia cli-mir-133a-2 precursor miRNA


Sequence

71051708 reads, 280529.0 reads per million, 27 experiments
uuugcuaaAGCUGGUAAAAUGGAACCAAAUcaacuguucaauggaUUUGGUCCCCUUCAACCAGCUGUagcugu
...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...

Structure
uuu    a       AA  U  A        aacug 
   gcua AGCUGGU  AA GG ACCAAAUc     u
   |||| |||||||  || || ||||||||      
   cgaU UCGACCA  UU CC UGGUUUag     u
ugu    G       AC  C  C        guaac 


Annotation confidence High
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Genome context
20: 4381580-4381653 [-]

Database links

Mature cli-miR-133a-5p

Accession MIMAT0038509
Description Columba livia cli-miR-133a-5p mature miRNA
Sequence 9 - AGCUGGUAAAAUGGAACCAAAU - 30
Evidence experimental
Illumina [1]

Mature cli-miR-133a-3p

Accession MIMAT0038510
Description Columba livia cli-miR-133a-3p mature miRNA
Sequence 46 - UUUGGUCCCCUUCAACCAGCUGU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196