miRBase entry: cli-mir-133c

Stem-loop cli-mir-133c


Accession
MI0029967
Description
Columba livia cli-mir-133c precursor miRNA


Sequence

auggugcgucccuggggcugguaaaaaggaaccagaucaacuugcaacuggaUUUGGUCCCCUUCAACCAGCUGCagcggcgcaugug
...(((((((.(((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))).)))))))...

Structure
aug       c   g       aa  a  a        aacuu 
   gugcguc cug ggcuggu  aa gg accagauc     g
   ||||||| ||| |||||||  || || ||||||||      
   uacgcgg gaC UCGACCA  UU CC UGGUUUag     c
gug       c   G       AC  C  C        gucaa 


Annotation confidence Not enough data
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Genome context
KB375684.1: 950877-950964 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cli-mir-133c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-133c-3p

Accession MIMAT0038513
Description Columba livia cli-miR-133c-3p mature miRNA
Sequence 53 - UUUGGUCCCCUUCAACCAGCUGC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196