Stem-loop cli-mir-135-1

Accession

MI0029968

Description

Columba livia cli-mir-135-1 precursor miRNA

Sequence

3046 reads, 29.0 reads per million, 25 experiments

ugcugucuugUAUGGCUUUUUAUUCCUAUGUGAUuauacaucccacuucaUAUAGGGAUUGAAGCCGUGCAAUacacug
...(((.((((((((((((..((((((((((((..............)))))))))))).)))))))))))).)))...

Structure

ugc   c            UU            Uuauac 
   ugu uugUAUGGCUUU  AUUCCUAUGUGA      a
   ||| ||||||||||||  ||||||||||||       
   aca AACGUGCCGAAG  UAGGGAUAUacu      u
guc   U            -U            ucaccc 

Annotation confidence Not enough data

Genome context

gb|KV877988.1|: 501686-501764 [+]

Mature cli-miR-135-5p

• Accession: MIMAT0038514
• Description: Columba livia cli-miR-135-5p mature miRNA
• Sequence: 11 - UAUGGCUUUUUAUUCCUAUGUGAU - 34
• Evidence: experimental ; Illumina [1]

Mature cli-miR-135-3p

• Accession: MIMAT0038515
• Description: Columba livia cli-miR-135-3p mature miRNA
• Sequence: 51 - UAUAGGGAUUGAAGCCGUGCAAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196