Stem-loop cli-mir-135-2

Accession

MI0029969

Description

Columba livia cli-mir-135-2 precursor miRNA

Sequence

3147 reads, 30.0 reads per million, 25 experiments

cuaguguuuUAUGGCUUUUUAUUCCUAUGUGAUaguaauaaagucucaUGUAGGGAUGGAAGCCAUGAAauacauu
...((((((((((((((((.((((((((((((.(.(.....).).))))))))))))))))))))))))))))...

Structure

cua                U            U g a 
   guguuuUAUGGCUUUU AUUCCUAUGUGA a u a
   |||||||||||||||| |||||||||||| | | u
   cauaAAGUACCGAAGG UAGGGAUGUacu u a a
uua                -            c g a 

Annotation confidence High

Genome context

1: 47676152-47676227 [+]

Mature cli-miR-135-5p

• Accession: MIMAT0038514
• Description: Columba livia cli-miR-135-5p mature miRNA
• Sequence: 10 - UAUGGCUUUUUAUUCCUAUGUGAU - 33
• Evidence: experimental ; Illumina [1]

Mature cli-miR-135-2-3p

• Accession: MIMAT0038516
• Description: Columba livia cli-miR-135-2-3p mature miRNA
• Sequence: 49 - UGUAGGGAUGGAAGCCAUGAA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196