Stem-loop cli-mir-135-3

Accession

MI0029970

Description

Columba livia cli-mir-135-3 precursor miRNA

Sequence

uaagcccucugcugugguuUAUGGCUUUUUAUUCCUAUGUGAuugcuuuuccuaacucAUGUAGGGCGAAAAGCCAUGGGcuacacagaggagggacucc
..((((((((.(((((((((((((((((((..((((((((((..............)))))))))).))))))))))))))..))))).)))))).))..

Structure

ua  -      g     --              AU          uugcuu 
  ag cccucu cugug  guuUAUGGCUUUUU  UCCUAUGUGA      u
  || |||||| |||||  ||||||||||||||  ||||||||||       
  uc gggagg gacac  cGGGUACCGAAAAG  GGGAUGUAcu      u
cc  a      a     au              -C          caaucc 

Annotation confidence Not enough data

Genome context

KB375465.1: 178788-178887 [+]

Mature cli-miR-135-5p

• Accession: MIMAT0038514
• Description: Columba livia cli-miR-135-5p mature miRNA
• Sequence: 20 - UAUGGCUUUUUAUUCCUAUGUGA - 42
• Evidence: experimental ; Illumina [1]

Mature cli-miR-135-3-3p

• Accession: MIMAT0038517
• Description: Columba livia cli-miR-135-3-3p mature miRNA
• Sequence: 59 - AUGUAGGGCGAAAAGCCAUGGG - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196