Stem-loop cli-mir-138-2

Accession

MI0029974

Description

Columba livia cli-mir-138-2 precursor miRNA

Sequence

cccgguauuggugcugcAGCUGGUGUUGUGAAUCAGGCCGacgacaagcgcauccuacuauccgGCUAUUUCACUACACCAGGGUugcaucauaccac
...(((((.(((((.((..(((((((.(((((...(((((......................)))))..))))).))))))).)).))))))))))..

Structure

ccc     u     u  AG       U     UCA     acgacaagcg 
   gguau ggugc gc  CUGGUGU GUGAA   GGCCG          c
   ||||| ||||| ||  ||||||| |||||   |||||           
   ccaua cuacg UG  GACCACA CACUU   UCGgc          a
-ca     -     u  -G       U     -UA     cuaucauccu 

Annotation confidence Not enough data

Genome context

KB375448.1: 10794987-10795084 [+]

Mature cli-miR-138-5p

• Accession: MIMAT0038522
• Description: Columba livia cli-miR-138-5p mature miRNA
• Sequence: 18 - AGCUGGUGUUGUGAAUCAGGCCG - 40
• Evidence: experimental ; Illumina [1]

Mature cli-miR-138-2-3p

• Accession: MIMAT0038524
• Description: Columba livia cli-miR-138-2-3p mature miRNA
• Sequence: 65 - GCUAUUUCACUACACCAGGGU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196