Stem-loop cli-mir-139

Accession

MI0029975

Description

Columba livia cli-mir-139 precursor miRNA

Sequence

ccaggccuggcuguauUCUACAGUGCAUGUGUCUCCAGUgugaguaagugacUGGAGAUGCAGCCCUGUUGGAAUaacaaccgggaccaca
...(((((((.((((((((((((.((.((((((((((((...........)))))))))))))).))).)))))).))).))))).))...

Structure

cca  -     c   -      -   U  A            guga 
   gg ccugg ugu auUCUA CAG GC UGUGUCUCCAGU    g
   || ||||| ||| |||||| ||| || ||||||||||||    u
   cc gggcc aca UAAGGU GUC CG ACGUAGAGGUca    a
aca  a     a   a      U   C  -            guga 

Annotation confidence Not enough data

Genome context

KB376564.1: 18329-18419 [+]

Mature cli-miR-139-5p

• Accession: MIMAT0038525
• Description: Columba livia cli-miR-139-5p mature miRNA
• Sequence: 17 - UCUACAGUGCAUGUGUCUCCAGU - 39
• Evidence: experimental ; Illumina [1]

Mature cli-miR-139-3p

• Accession: MIMAT0038526
• Description: Columba livia cli-miR-139-3p mature miRNA
• Sequence: 53 - UGGAGAUGCAGCCCUGUUGGAAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196