miRBase entry: cli-mir-145

Stem-loop cli-mir-145

Accession

MI0029979

Description

Columba livia cli-mir-145 precursor miRNA

Sequence

ccgugcccucaggGUCCAGUUUUCCCAGGAAUCCCUuaggcgcuacguuggGGAUUCCUGGAAAUACUGUUCUUgaggccacgg
(((((.((((((((..((((.((.((((((((((((..((((...)))))))))))))))).)).)))).)))))))).)))))

Structure

     c        UC    U  C            ua    c 
ccgug ccucaggG  CAGU UU CCAGGAAUCCCU  ggcg  
||||| ||||||||  |||| || ||||||||||||  |||| u
ggcac ggagUUCU  GUCA AA GGUCCUUAGGgg  uugc  
     c        -U    U  A            --    a

Annotation confidence Not enough data

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Genome context

KB375668.1: 918669-918752 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-145

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-145-5p

Accession	MIMAT0038533
Description	Columba livia cli-miR-145-5p mature miRNA
Sequence	14 - GUCCAGUUUUCCCAGGAAUCCCU - 36
Evidence	experimental Illumina [1]

Mature cli-miR-145-3p

Accession	MIMAT0038534
Description	Columba livia cli-miR-145-3p mature miRNA
Sequence	52 - GGAUUCCUGGAAAUACUGUUCUU - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196