Stem-loop cli-mir-146b

Accession

MI0029981

Description

Columba livia cli-mir-146b precursor miRNA

Sequence

965627 reads, 14984.0 reads per million, 30 experiments

cuggcuacuuggcucUGAGAACUGAAUUCCAUAGGCAUUaaagccucuaaaaaUGCCCUAUGGAUUCAGUUCUGCAgcugggcagcaaa
...(((.(((((((...((((((((((.(((((((((((............)))).)))))))))))))))))..))))))).)))...

Structure

cug   a       cUG          U       -    aaagc 
   gcu cuuggcu   AGAACUGAAU CCAUAGG CAUU     c
   ||| |||||||   |||||||||| ||||||| ||||      
   cga gggucgA   UCUUGACUUA GGUAUCC GUaa     u
aaa   c       -CG          -       C    aaauc 

Annotation confidence High

Genome context

7: 19123889-19123977 [+]

Mature cli-miR-146b-5p

• Accession: MIMAT0038537
• Description: Columba livia cli-miR-146b-5p mature miRNA
• Sequence: 16 - UGAGAACUGAAUUCCAUAGGCAUU - 39
• Evidence: experimental ; Illumina [1]

Mature cli-miR-146b-3p

• Accession: MIMAT0038538
• Description: Columba livia cli-miR-146b-3p mature miRNA
• Sequence: 54 - UGCCCUAUGGAUUCAGUUCUGCA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196