Stem-loop cli-mir-147

Accession

MI0029983

Description

Columba livia cli-mir-147 precursor miRNA

Sequence

3551 reads, 78.0 reads per million, 30 experiments

gguacccuaugaauCUAGUGGAAUCACUUCUGCACaaacuugacuacugaaaucaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagggucuc
((.((((((.((((.((((((((.((.((((((((..........((((....)))))))))))).)).)))))))).)))).)))))))).

Structure

-  u      u    C        U  C        aaacuugacu    a 
 gg acccua gaau UAGUGGAA CA UUCUGCAC          acug a
 || |||||| |||| |||||||| || ||||||||          ||||  
 uc ugggau uuua AUCGUCUU GU AAGGCGUG          UGac a
c  -      u    c        C  A        ----------    u 

Annotation confidence Not enough data

Genome context

10: 16757942-16758033 [-]

Mature cli-miR-147-5p

• Accession: MIMAT0059184
• Description: Columba livia cli-miR-147-5p mature miRNA
• Sequence: 15 - CUAGUGGAAUCACUUCUGCAC - 35
• Evidence: experimental ; Illumina [1]

Mature cli-miR-147-3p

• Accession: MIMAT0038541
• Description: Columba livia cli-miR-147-3p mature miRNA
• Sequence: 56 - GUGUGCGGAAAUGCUUCUGCUA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196