Stem-loop cli-mir-148b

Accession

MI0029985

Description

Columba livia cli-mir-148b precursor miRNA

Sequence

65748 reads, 372.0 reads per million, 28 experiments

gcgcccggggcGAGGUUCUGUCCUACACUCCGGCUguagcuacagacagUCAGUGCAUCACAGAACUUGGUcccgggagc
((.((((((((.(((((((((....((((..((((((........))))))))))....))))))))).)))))))).))

Structure

  g        G         CCUA    CC      agc 
gc cccggggc AGGUUCUGU    CACU  GGCUgu   u
|| |||||||| |||||||||    ||||  ||||||    
cg gggcccUG UUCAAGACA    GUGA  CUgaca   a
  a        G         CUAC    --      gac 

Annotation confidence High

Genome context

KB376284.1: 322350-322429 [+]

Mature cli-miR-148b-5p

• Accession: MIMAT0059185
• Description: Columba livia cli-miR-148b-5p mature miRNA
• Sequence: 12 - GAGGUUCUGUCCUACACUCCGGCU - 35
• Evidence: experimental ; Illumina [1]

Mature cli-miR-148b-3p

• Accession: MIMAT0038544
• Description: Columba livia cli-miR-148b-3p mature miRNA
• Sequence: 50 - UCAGUGCAUCACAGAACUUGGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196