Stem-loop cli-mir-153b

Accession

MI0029987

Description

Columba livia cli-mir-153b precursor miRNA

Sequence

5239 reads, 473.0 reads per million, 26 experiments

uuagcgguugccaguGUCAUUUUUGUGAUGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauuggaaacugugac
...((((((.(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))).))))))...

Structure

uua      g      -             GU       -a  aa 
   gcgguu ccaguG UCAUUUUUGUGAU  UGCAGCU  gu  u
   |||||| |||||| |||||||||||||  |||||||  ||  a
   ugucaa gguuaC AGUGAAAACACUG  ACGUUga  cg  u
cag      a      U             AU       cc  ag 

Annotation confidence High

Genome context

2: 9339182-9339272 [-]

Mature cli-miR-153b-5p

• Accession: MIMAT0038547
• Description: Columba livia cli-miR-153b-5p mature miRNA
• Sequence: 16 - GUCAUUUUUGUGAUGUUGCAGCU - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-153b-3p

• Accession: MIMAT0038548
• Description: Columba livia cli-miR-153b-3p mature miRNA
• Sequence: 55 - UUGCAUAGUCACAAAAGUGAUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196