Stem-loop cli-mir-196-3

Accession

MI0030002

Description

Columba livia cli-mir-196-3 precursor miRNA

Sequence

gagaacugcucugugguuUAGGUAGUUUCAUGUUGUUGGGgcuccaccuuucucuCUACAGCACGAAACUGCCUUAAuuacuucaguugau
...(((((....((((((.((((((((((.((((((.((((...........)))).)))))).)))))))))).))))))..)))))...

Structure

gag     cucu      U          A      U    cucc 
   aacug    gugguu AGGUAGUUUC UGUUGU GGGg    a
   |||||    |||||| |||||||||| |||||| ||||    c
   uugac    cauuAA UCCGUCAAAG ACGACA Cucu    c
uag     --uu      U          C      U    cuuu 

Annotation confidence Not enough data

Genome context

KB376037.1: 1139776-1139866 [-]

Mature cli-miR-196-5p

• Accession: MIMAT0038570
• Description: Columba livia cli-miR-196-5p mature miRNA
• Sequence: 19 - UAGGUAGUUUCAUGUUGUUGGG - 40
• Evidence: experimental ; Illumina [1]

Mature cli-miR-196-3-3p

• Accession: MIMAT0038572
• Description: Columba livia cli-miR-196-3-3p mature miRNA
• Sequence: 56 - CUACAGCACGAAACUGCCUUAA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196