Accession
MI0030005
Description
Columba livia
cli-mir-200a precursor miRNA
Sequence
50395
reads,
4157.0
reads per million, 30 experiments
ccaugguccucugugggCAUCUUACUAGACAGUGCUGGAUuuuuuggaucuacucUAACACUGUCUGGUAACGAUGUUUaaagggugaaccaaac
...(((((((((.(((((((((((((((((((((.((((..............)))).))))))))))))).)))))))).)))).).))))...
...(((((((((.(((((((((((((((((((((.((((..............)))).))))))))))))).)))))))).)))).).))))...
Structure
cca - - g - C Uuuuuu uggu c cucu ugggCAUC UUACUAGACAGUG UGGA g |||| | |||| |||||||| ||||||||||||| |||| acca g ggga aUUUGUAG AAUGGUCUGUCAC AUcu g caa a u a C A caucua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
21: 2160518-2160612 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cli-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cli-miR-200a-5p
| Accession | MIMAT0038575 |
| Description | Columba livia cli-miR-200a-5p mature miRNA |
| Sequence | 18 - CAUCUUACUAGACAGUGCUGGAU - 40 |
| Evidence |
experimental
Illumina [1] |
Mature cli-miR-200a-3p
| Accession | MIMAT0038576 |
| Description | Columba livia cli-miR-200a-3p mature miRNA |
| Sequence | 56 - UAACACUGUCUGGUAACGAUGUUU - 79 |
| Evidence |
experimental
Illumina [1] |
References
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