Stem-loop cli-mir-205a

Accession

MI0030011

Description

Columba livia cli-mir-205a precursor miRNA

Sequence

78907 reads, 18410.0 reads per million, 30 experiments

caauccauggguucuguugUCCUUCAUUCCACCGGAGUCUGUcucauaccuaaaccaGAUUUCAGUGGAGUGAAGUACGagagacauggagau
...((((((...(((.((((.(((((((((((.((((((((..............)))))))).))))))))))).)))).)))))))))...

Structure

caa      ggu   g    C           C        Ucucau 
   uccaug   ucu uugU CUUCAUUCCAC GGAGUCUG      a
   ||||||   ||| |||| ||||||||||| ||||||||       
   agguac   aga aGCA GAAGUGAGGUG CUUUAGac      c
uag      ---   g    U           A        caaauc 

Annotation confidence High

Genome context

26: 759954-760046 [-]

Mature cli-miR-205a-5p

• Accession: MIMAT0038584
• Description: Columba livia cli-miR-205a-5p mature miRNA
• Sequence: 20 - UCCUUCAUUCCACCGGAGUCUGU - 42
• Evidence: experimental ; Illumina [1]

Mature cli-miR-205a-3p

• Accession: MIMAT0038585
• Description: Columba livia cli-miR-205a-3p mature miRNA
• Sequence: 58 - GAUUUCAGUGGAGUGAAGUACG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196