Stem-loop cli-mir-205b

Accession

MI0030012

Description

Columba livia cli-mir-205b precursor miRNA

Sequence

2056 reads, 16.0 reads per million, 22 experiments

cuuggcaCCCUUCAUUCCACCGGAAUCUGUcuauacagaaaccaGAUUUCAGUGAAAUGAAGCCUGUcagagaggcag
.((((((..(((((((.(((.(((((((((((....)))...)))))))).))).)))))))..))))))........

Structure

-------c      CC       C   C        ---   a 
        uuggca  CUUCAUU CAC GGAAUCUG   Ucu u
        ||||||  ||||||| ||| ||||||||   |||  
        gacUGU  GAAGUAA GUG CUUUAGac   aga a
gacggaga      CC       A   A        caa   c 

Annotation confidence High

Genome context

1: 1037985-1038062 [-]

Mature cli-miR-205b-5p

• Accession: MIMAT0038586
• Description: Columba livia cli-miR-205b-5p mature miRNA
• Sequence: 8 - CCCUUCAUUCCACCGGAAUCUGU - 30
• Evidence: experimental ; Illumina [1]

Mature cli-miR-205b-3p

• Accession: MIMAT0038587
• Description: Columba livia cli-miR-205b-3p mature miRNA
• Sequence: 45 - GAUUUCAGUGAAAUGAAGCCUGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196